PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_014497
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family WRKY
Protein Properties Length: 185aa    MW: 20671 Da    PI: 9.8509
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_014497genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.41.3e-32103161159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK vk+++fprsYY+Ct++gC+vkk+v+r ++d+ vv++tYeg H+h+
  DCAR_014497 103 LDDGYRWRKYGQKAVKNNKFPRSYYKCTYQGCNVKKQVQRLSKDEGVVVTTYEGMHTHS 161
                  59********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.7E-3488161IPR003657WRKY domain
SuperFamilySSF1182901.7E-2995162IPR003657WRKY domain
PROSITE profilePS5081129.59798163IPR003657WRKY domain
SMARTSM007741.3E-38103162IPR003657WRKY domain
PfamPF031062.6E-26104160IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MENYPMLFLG SGATAPNSLG SSNNNSRSNN STFYNNPNGF FGMLRSDVHG SSTSSEAKDG  60
AENSNSGSFQ VTESELGKKK KGDQKKAKKP RFAFQTRSQV DILDDGYRWR KYGQKAVKNN  120
KFPRSYYKCT YQGCNVKKQV QRLSKDEGVV VTTYEGMHTH SIEKPTDNFE QILSDMKICP  180
PTYN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-2993162776Probable WRKY transcription factor 4
2lex_A7e-2993162776Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009343134.12e-68PREDICTED: probable WRKY transcription factor 75
TrEMBLD7SVN09e-66D7SVN0_VITVI; Putative uncharacterized protein
TrEMBLI3RQB59e-66I3RQB5_9R
STRINGVIT_14s0068g01770.t013e-65(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22042461
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.15e-52WRKY DNA-binding protein 75